MadSci Network: Genetics |
This is an interesting question Sean, and at first blush, it seems like a chicken and egg problem, but upon some contemplation we can see that this ain't necessarily so. First let me give a little basic background on RNA splicing. Most genes, both those encoding proteins and those encoding RNA molecules (e.g. ribosomal RNA) contain regions of coding sequence (exons) separated by regions of non-coding sequence (introns). When RNA is first transcribed from these genes, the RNA contains both the exons and introns (this RNA is called heterogeneous nuclear RNA, or hnRNA). In order for a functional end product to result, the intronic sequence must be spliced out of the RNA. The splicing out of introns is achieved through a series of steps whereby the intron is cut out of the RNA and the ends of the two exons are joined together. This occurs in the nucleus of the cell and involves a complex of small nuclear RNAs and proteins, not just one protein. The small nuclear RNAs (snRNAs) are about 100-300 bases long. To my knowledge, their DNA sequences do not contain introns, however (and here is where it gets weird) several of theses snRNAs are encoded by intronic sequences from other protein-encoding genes. The proteins associated with splicing belong to a class of proteins which interact with snRNAs to form complexes known as ribonucleoproteins (often referred to as snRNPs or "snurps"). There are many snRRPs in the nucleus; some function in RNA splicing and some function in ribosomal processing and translation. The snRNPs involved in splicing, together with other protein factors, comprise a large structure called the spliceosome. This structure is responsible for splicing out most intronic sequences (some RNA sequences can cut out their own introns), these introns are recognized because they have GT-AG dinucleotides at their 5' and 3' ends as well as a couple of other semi-conserved sequences. The genes encoding the proteins found in the spliceosomes do indeed contain introns, which leads directly to your question. If these proteins involved in RNA splicing are derived from genes which need to be spliced, how can this be? The answer is that the spliceosome complex already exists in the nucleus of the cell. When I say cell, think egg. The egg, or ovum, contains a nucleus, proteins, ribosomes, mitochondria, endoplasmic reticulum, i.e., all the structures and building materials needed to begin transcription, translation, and cellular division once it is fertilized. The nucleus of the ovum also contains splicesomes as well as the individual snRNAs and proteins needed to form additional splicesome complexes. And, when a cell divides it basically splits up its furnishings as it were, so that each new daughter cell gets an equal share of everything, including the splicesomes.
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