| MadSci Network: Biochemistry |
Phosphate groups in ALL organisms is the major covalent modification of
proteins and carbon substrates that allows for the regulation, organization
and efficency of most biochemical pathways within the cell.
Phosphate is also a central part of the major molecule within the cell (ATP
and GTP) that sequesters and stores energy for use in chemical reactions.
The cell (in both plants and animals) produces many proteins (enzymes) which
are specialized for transfering phosphate groups. Phosphatases REMOVE
phosphate groups and Kinases ADD phosphate groups (by transfering it FROM
ATP to a substrate). These specialized enzymes are needed to direct the
transfer of phosphate from one substrate to another.
A biochemical pathways are regulated by phosphoryl group transfers. An
enzyme required to catalyze a particular reaction in the pathway may only
recognize and bind to the phosphorylated form of a particular substrate
compound. Therefore, the pathway is inhibited until the molecule is
phosphorylated (or "activated"), and that enzyme is said to be "specific"
for the phosphorylated form of the substrate. Also, phosphoryl groups are
used to "energize" a substrate or reactant in a biochemical pathway. A
reaction may not be energenicaly favorable until a phosphate group (ATP) is
added to the reaction. The energy stored in the form of a chemical bond
between the last two phosphate groups of ATP (the beta and gamma phosphates)
is released and utilized by the enzyme to drive the energenitcally
unaforable reaction foward. (the large amount of energy given off by
breaking this bond and the ease in breaking it are major reasons why ATP is
the major energy "coin" within the cell). In the plant cell, for example,
the Calvin Cycle is a main biochemical pathway the plant uses to produce its
own "food" from CO2 (called carbond fixation). In this pathway, Kinases are
used to add phosphate (from ATP) to Ribulose 1 phosphate to produce
Ribuloase 1,5 bis phosphate (RUBP). This reaction is required to "activate"
RUBP for future ("down-stream") reactions. Phosphatases are also used in
this pathway such as Fructose 1,6 bisphosphatase to create fructose 6
phosphate.
Once phosphates are removed from a substrate, the free phosphate groups
add to the concentration of free phosphate within the cell and will soon
become incorporated into another ATP (or GTP) molecule. The rate of turn-
over of ATP molecules within the cell is high. Phosphate groups are rapidly
being added to ADP and released. Also, as the concentration of free
phosphate increases within the cell, the rate of ATP production also
increases, so that the cell is not depleated of this important molecule.
I hope this helps! consult a Biochemistry textbook (I recommend
Stryer) if you have any further interests/questions.
Try the links in the MadSci Library for more information on Biochemistry.