MadSci Network: Biochemistry |
Phosphate groups in ALL organisms is the major covalent modification of proteins and carbon substrates that allows for the regulation, organization and efficency of most biochemical pathways within the cell. Phosphate is also a central part of the major molecule within the cell (ATP and GTP) that sequesters and stores energy for use in chemical reactions. The cell (in both plants and animals) produces many proteins (enzymes) which are specialized for transfering phosphate groups. Phosphatases REMOVE phosphate groups and Kinases ADD phosphate groups (by transfering it FROM ATP to a substrate). These specialized enzymes are needed to direct the transfer of phosphate from one substrate to another. A biochemical pathways are regulated by phosphoryl group transfers. An enzyme required to catalyze a particular reaction in the pathway may only recognize and bind to the phosphorylated form of a particular substrate compound. Therefore, the pathway is inhibited until the molecule is phosphorylated (or "activated"), and that enzyme is said to be "specific" for the phosphorylated form of the substrate. Also, phosphoryl groups are used to "energize" a substrate or reactant in a biochemical pathway. A reaction may not be energenicaly favorable until a phosphate group (ATP) is added to the reaction. The energy stored in the form of a chemical bond between the last two phosphate groups of ATP (the beta and gamma phosphates) is released and utilized by the enzyme to drive the energenitcally unaforable reaction foward. (the large amount of energy given off by breaking this bond and the ease in breaking it are major reasons why ATP is the major energy "coin" within the cell). In the plant cell, for example, the Calvin Cycle is a main biochemical pathway the plant uses to produce its own "food" from CO2 (called carbond fixation). In this pathway, Kinases are used to add phosphate (from ATP) to Ribulose 1 phosphate to produce Ribuloase 1,5 bis phosphate (RUBP). This reaction is required to "activate" RUBP for future ("down-stream") reactions. Phosphatases are also used in this pathway such as Fructose 1,6 bisphosphatase to create fructose 6 phosphate. Once phosphates are removed from a substrate, the free phosphate groups add to the concentration of free phosphate within the cell and will soon become incorporated into another ATP (or GTP) molecule. The rate of turn- over of ATP molecules within the cell is high. Phosphate groups are rapidly being added to ADP and released. Also, as the concentration of free phosphate increases within the cell, the rate of ATP production also increases, so that the cell is not depleated of this important molecule. I hope this helps! consult a Biochemistry textbook (I recommend Stryer) if you have any further interests/questions.
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