MadSci Network: Biochemistry |
As you know, enzymes are proteins - biomolecules formed by an amino-acid chain. You find 20 common amino acids(aa's) in nature. Each functional protein is constituted by a specific order of aa's. A different aa order and/or nature effects the shape of the protein and finally its function. You need to know that each enzyme has its specific shape, determined by the primary aa sequence, which takes firstly, a "virtual" secondary structure, and finally a tertiary structure, the final structure of a primitive enzyme (other enzymes are constituted by several tertiary structures forming one fundamental biomolecule like hemoglobin for example). How is an enzyme shaped? The answer is not very simple. First thing to know is that each aa has specific chemical properties: some are acids others bases,etc...). Interactions between different aa of the sequence allow a specific shape: the nature of an interaction is different according the aa linked: for example ionic bonds, covalent bonds, or hydrogen bonds, etc. The classical procedure to find out a structure is crystallographic diffraction study through X-rays and then computer treatment of the results (very complicated). To conclude: each enzyme has a specific shape according to a specific function into the cell or not; a changing shape can affect the function of the enzyme (see Anfinsen's works on the ribonuclease); to stabilize the existing shape through weak interactions between aa, two sulfur-bearing (methyonin (rare) and cystein) aa's can establish a kind of "sulfur-bridge" for a strong interaction. Unfortunately I don't have further infos about catalase: you find this enzyme in peroxysomes, special intracellular compartments involved in detoxification. I can send you a picture of lysozyme, an enzyme also found essentially in lysosomes, other intracellular compartments. You will have an example of enzyme shape.
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