| MadSci Network: Biochemistry |
EDTA:
is an abbreviation of Ethylenediaminetetraacetic
acid, which is also known as edetate, versene, or sequestrene. EDTA is, as you
point out, a chelator, meaning that it binds to and makes unavailable metal ions
in a solution. EDTA specifically chelates divalent cations (ions with a +2
charge), such as magnesium, manganese, zinc, and calcium (Mg+2,
Mn+2, Zn+2, and Ca+2, respectively). Since
these ions are essential for many enzymes to function, EDTA can be used to halt
cellular activity, thus acting as a preservative. However, the cellular
activities of one particular divalent cation, Ca+2, go far beyond
simply acting as a cofactor, and the relatively low affinity for Ca+2,
compared to Mg+2 or Mn+2, make EDTA a poor candidate for
studying the effects and requirements of Ca+2 on cells. So,
researchers use:
EGTA:
or Ethylene glycol-bis(beta-aminoethyl ether)-N,N,N',N'-t
etraacetic acid, which preferentially binds Ca+2 with a
significantly greater affinity than the other divalent cations, when they need to
study Ca+2. Thus, molecular geneticists studying DNA use a lot of
EDTA - most DNA-cutting enzymes require Mg+2 to function - while
molecular physiologists studying nerves, muscles, or cell signaling use EGTA,
which affects Ca+2 currents without influencing other enzyme
activities.
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